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PDBCat


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OS: Linux, ...

License: Freeware





The Brookhaven Protein Data Bank stores atomic coordinate information for protein structures in a column based format. This is designed to be read easily read by FORTRAN programs. Indeed, if you get the format description (from anonymous ftp to ftp.pdb.bnl.gov, the file /pub/format.desc.ps) they show the single input line needed to read each record type.

Read any pdb file from stdin or list of files and convert the data to either a column based or field based pdb file. A '#' represents an empty field. This is useful for field based tools like awk. The default output is 'columns'.

http://www.ks.uiuc.edu/Development/MDTools/pdbcat/



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