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338 Database entries




Ratings:    7  votes

Jmol

Jmol: an open-source Java viewer for chemical structures in 3D


Ratings:    9  votes

wxDragon

wxDragon is a visualization program for Gaussian, VASP, ADF, Turbomole, Gamess, WIEN2K, Siesta, ...


Ratings:    5  votes

Ascalaph-Quantum

Ascalaph Quantum provides interfaces to ab initio quantum mechanical packages NWChem, CP2K and PC GAMESS.


Ratings:    9  votes

Avogadro

Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible rendering and a powerful plugin architecture.


Ratings:    1  votes

GaussSum

GaussSum is a GUI application that can analyse the output of ADF, GAMESS (US), GAMESS-UK, Gaussian, Jaguar and PC GAMESS to extract and calculate useful information.


Ratings:    6  votes

VMD

VMD is a very powerful molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting.


Ratings:    9  votes

Gabedit

Gabedit is a graphical user interface to computational chemistry packages like Gamess-US, Gaussian, Molcas, Molpro, MPQC, OpenMopac, PCGamess and Q-Chem.


Ratings:    6  votes

Mercury

Mercury offers a comprehensive range of tools for structure visualisation and the exploration of crystal packing.


Ratings:    27  votes

VESTA

VESTA is a 3D visualization program for structural models, volumetric data such as electron/nuclear densities, and crystal morphologies.


Ratings:    2  votes

PyVib2

PyVib2 is a program for analyzing vibrational motion and vibrational spectra, written in pure Python.


Ratings:    2  votes

SCHAKAL

SCHAKAL is a FORTRAN program for the graphic representation of molecular and solid-state structure models.


Ratings:    16  votes

ArgusLab

A molecular modeling, graphics, and drug design program


Ratings:    3  votes

UCSF_Chimera

UCSF Chimera is a highly extensible program for interactive visualization and analysis of molecular structures and related data, including density maps, supramolecular assemblies, sequence alignments, docking results, trajectories, and conformational ensembles.


Ratings:    4  votes

Xvibs

A utility for animating molecular vibrations. Normal modes are read from a file automatically determined to be from Aces2, Gamess, PC Gamess, Gaussian 90/92/95/94/98, ADF, Dalton, Jaguar, MOPAC, or HyperChem.


Ratings:    10  votes

p4vasp

The p4vasp package is a set of tools for processing xml-formatted VASP output.


Ratings:    22  votes

MOLDEN

MOLDEN is a pre- and post processing program of molecular and electronic structure


Ratings:    1  votes

XMakemol

XMakemol is a mouse-based program, written using the LessTif widget set, for viewing and manipulating atomic and other chemical systems.


Ratings:    8  votes

RasTop

RasTop is a molecular visualization software adapted from the program RasMol. RasTop is particularly adapted for educational purposes and for the rapid analysis of macromolecules at the bench.


Ratings:    4  votes

QMOL

Qmol is a program for viewing molecular structures and animating molecular trajectories.


Ratings:    2  votes

RasMol-OpenRasMol

RasMol is a molecular graphics program intended for the visualisation of proteins, nucleic acids and small molecules.


Ratings:    2  votes

WebMol

WebMol was designed to display and analyze structural information contained in the Brookhaven Protein Data Bank (PDB). It can be run as an applet or as a stand-alone application.


Ratings:    3  votes

PyMOL

PyMOL is a USER-SPONSORED molecular visualization system on an OPEN-SOURCE foundation.


Ratings:    9  votes

XCrySDen

XCrySDen is a crystalline- and molecular-structure visualisation program.


Ratings:    2  votes

ZORTEP

ZORTEP allows the 'real-time' graphical rotation and manipulation of structures and/or thermal ellipsoids on the screen.


Ratings:    3  votes

GDIS

GDIS is a GTK based program for the display and manipulation of isolated molecules and periodic systems.


Ratings:    1  votes

Swiss-PdbViewer

Swiss-PdbViewer (aka DeepView) is an application that provides a user friendly interface allowing to analyze several proteins at the same time.


Ratings:    0  votes

Bioclipse

The Bioclipse project is aimed at creating a Java-based, open source, visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP).


Ratings:    0  votes

Bodil

Bodil is a modular, multi-platform software package for biomolecular visualization and modeling.


Ratings:    0  votes

CCP1GUI

Graphical interface for the GAMESS-UK program, and working interfaces for Dalton, Molpro, ChemShell and MOPAC.


Ratings:    0  votes

DINO

DINO is a realtime 3D visualization program for structural biology data.


Ratings:    0  votes

DL_Visualize

DL Visualize is a new, state-of-the-art package for the visualization of materials structures and properties.


Ratings:    0  votes

DRAWxtl

DRAWxtl produces a screen display of a crystal-structure diagram in real time, and also produces output files.


Ratings:    0  votes

ECCE

The Extensible Computational Chemistry Environment provides a sophisticated graphical user interface, scientific visualization tools, and the underlying data management framework enabling scientists to efficiently set up calculations and store, retrieve, and analyze the rapidly growing volumes of data produced by computational chemistry studies.


Ratings:    0  votes

FlexV

FlexV is a free, fast, general-purpose visualizer.


Ratings:    0  votes

GAMGI

General Atomistic Modelling Graphic Interface is a package to construct, view and analyse atomic structures, as powerful and simple to use as possible.


Ratings:    0  votes

Garlic

Garlic is the most portable molecular viewer in the Unix world.


Ratings:    0  votes

gcrystal

Light model visualizer for crystal structures


Ratings:    0  votes

gdpc

gdpc is a program for visualising molecular dynamic simulations.


Ratings:    0  votes

gOpenMol

gOpenMol is a tool for the visualization and analysis of molecular structures and their chemical properties.


Ratings:    0  votes

Jamberoo

Jamberoo (former JMolEditor) is a program for displaying, analyzing, editing, converting, and animating molecular systems.


Ratings:    0  votes

Java-Structure-Viewer

Java based 3D structure viewer.


Ratings:    0  votes

JChemPaint

JChemPaint is the editor and viewer included in CDK for 2D chemical structures.


Ratings:    0  votes

JMap3D

This program takes volumetric data (particularly electron density data) and polygonises them, in order to produce up to five iso-surfaces.


Ratings:    0  votes

KMovisto

KMovisto is a real 3-D molecule viewer for LINUX.


Ratings:    0  votes

KryoMol

KryoMol is a KParts based program for analysis and visualization of chemical data.


Ratings:    0  votes

MacMolPlt

A modern graphics program for plotting 3-D molecular structures and normal modes and moelcule builder for mainly GAMESS


Ratings:    0  votes

Marvin

contains MarvinSketch (chemical editor), MarvinView (molecular structure viewer), MarvinSpace (molecular structure visualization program).


Ratings:    0  votes

Molmol

MOLecule analysis and MOLecule display


Ratings:    0  votes

MolScript

MolScript is a program for displaying molecular 3D structures, such as proteins, in both schematic and detailed representations.


Ratings:    0  votes

MolSurfer

MolSurfer is a graphical tool that links a 2D projection of a macromolecular interface to a 3D view of the macromolecular structures.


Ratings:    0  votes

Moviemol

An Easy-to-Use Molecular Display and Animation Program.


Ratings:    0  votes

O

O is a general purpose macromolecular modelling environment. The program is aimed at scientists with a need to model, build and display macromolecules.


Ratings:    0  votes

QuteMol

QuteMol is an open source (GPL), interactive, high quality molecular visualization system.


Ratings:    0  votes

v-sim

V_Sim visualizes atomic structures such as crystals, grain boundaries, molecules and so on (either in binary format, or in plain text format).


Ratings:    0  votes

Viewmol

Viewmol is an open source graphical front end for computational chemistry programs.


Ratings:    0  votes

MolWorks

MolWorks is an integrated software tool for molecular design. MolWorks supports a molecular builder and pre/post interface to quantum mechanics calculation software, such as Gaussian, MOPAC and GAMESS.


Ratings:    0  votes

OpenAstexViewer

OpenAstexViewer is a Java molecular graphics program that assists in structure based drug design.


Ratings:    0  votes

Aten

Create, edit, and visualise atomic coordinates (also periodic systems).


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